Ubuntu
lam package

Library transition lam4c2 to liblam4

Bug #202337 reported by Cesare Tirabassi
2
Affects Status Importance Assigned to Milestone
alps-light1 (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
clustalw-mpi (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
hdf5 (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
lam (Ubuntu)
Fix Released
Medium
Unassigned
netpipe (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
python-scientific (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
tessa (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
tree-puzzle (Ubuntu)
Fix Released
Medium
Cesare Tirabassi
xmpi (Ubuntu)
Fix Released
Medium
Cesare Tirabassi

Bug Description

As part of the gfortran transition (see https://bugs.launchpad.net/ubuntu/+source/lam/+bug/201962), the lam4c2 library has been deprecated and substituted with the liblam4 library.
This is the current list of rdepends which need to be patched to substitute the new correct dependency:

clustalw-mpi (not part of the transition)
 xmpi (not part of the transition)
 tree-ppuzzle (not part of the transition)
 tessa-mpi (not part of the transition)
 scalapack1-lam (part of the transition)
 scalapack-lam-test (part of the transition)
 netpipe-lam (not part of the transition)
 libhdf5-lam-1.6.5-0 (not part of the transition)
 libalps-mpi1 (not part of the transition)
 lampython (not part of the transition)
 lam4-dev (part of the transition)
 lam-runtime (part of the transition)
 gromacs-openmpi (part of the transition)
 gromacs-lam (part of the transition)
 blacs1-lam (part of the transition)
 blacs-lam-test (part of the transition)

Cesare Tirabassi (norsetto)
Changed in lam:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Changed in tree-puzzle:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Changed in clustalw-mpi:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Changed in tessa:
importance: Undecided → Medium
status: New → In Progress
assignee: nobody → norsetto
Changed in netpipe:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Changed in hdf5:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Changed in alps-light1:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Cesare Tirabassi (norsetto)
Changed in python-scientific:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Revision history for this message
Cesare Tirabassi (norsetto) wrote :

Waiting for sync of new lam package from debian unstable. See:

https://bugs.launchpad.net/ubuntu/+source/lam/+bug/202341

Cesare Tirabassi (norsetto)
Changed in xmpi:
assignee: nobody → norsetto
importance: Undecided → Medium
status: New → In Progress
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package alps-light1 - 1.2.2-2.1ubuntu2

---------------
alps-light1 (1.2.2-2.1ubuntu2) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in alps-light1:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package clustalw-mpi - 0.13-3build1

---------------
clustalw-mpi (0.13-3build1) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in clustalw-mpi:
status: In Progress → Fix Released
Revision history for this message
Cesare Tirabassi (norsetto) wrote :

lam (7.1.2-1.3) unstable; urgency=low

  * Non-maintainer upload.
  * Fix the second argument to main() in the test programs used by configure.
     Fixes FTBFS with gcc-4.3. (Closes: #468065)

 -- James Vega <email address hidden> Sun, 09 Mar 2008 00:13:40 -0500

lam (7.1.2-1.2) unstable; urgency=low

  * Non-maintainer upload.
  * Upload to unstable

 -- Riku Voipio <email address hidden> Sat, 09 Feb 2008 23:04:48 +0200

lam (7.1.2-1.1) experimental; urgency=low

  * Non-maintainer upload.
  * transition to gfortran, closes: #456418
  * rename package for long double transition, closes: #430241
  * remove pre-depends on stone-age dpkg version
  * remove versioned depends on essential package findutils and debianutils
  * Depend on ssh-client instead of ssh, closes: #418988
  * Edit changelog to get rid of lintian warning on long changelog

 -- Riku Voipio <email address hidden> Tue, 29 Jan 2008 22:24:19 +0200

Changed in lam:
assignee: norsetto → nobody
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package hdf5 - 1.6.5-5.2build1

---------------
hdf5 (1.6.5-5.2build1) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in hdf5:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package netpipe - 3.6.2-2build2

---------------
netpipe (3.6.2-2build2) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 and libmpich1.0c2 -> libmpich1.0gf
    transistions (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in netpipe:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package python-scientific - 2.4.11-1ubuntu3

---------------
python-scientific (2.4.11-1ubuntu3) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in python-scientific:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package tessa - 0.3.1-4ubuntu2

---------------
tessa (0.3.1-4ubuntu2) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in tessa:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package tree-puzzle - 5.2-2build1

---------------
tree-puzzle (5.2-2build1) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transistion (LP: #202337).
  * Since @cdbs@ is used in control.in, also change debhelper versioning
    to (>= 5.0.7ubuntu4). Package version not ubuntized so that we can still
    (auto)sync.

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in tree-puzzle:
status: In Progress → Fix Released
Revision history for this message
Launchpad Janitor (janitor) wrote :

This bug was fixed in the package xmpi - 2.2.3b8-10ubuntu3

---------------
xmpi (2.2.3b8-10ubuntu3) hardy; urgency=low

  * Rebuild for lam4c2 -> liblam4 transition (LP: #202337).

 -- Cesare Tirabassi <email address hidden> Tue, 25 Mar 2008 17:36:00 +0100

Changed in xmpi:
status: In Progress → Fix Released
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